Difference between revisions of "Official file locations"

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This document describes where files live, officially, on the cluster.  
 
This document describes where files live, officially, on the cluster.  
  
= Who is responsible for these? =
+
= Lost and found =
Are they current? do we still need them?  
+
Are these needed?
 
  /mnt/nfs/exc/zinc22/dude-xtract  
 
  /mnt/nfs/exc/zinc22/dude-xtract  
  
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  /nfs/exb/zinc22/tarballs - raw 50-mer tarballs Aug 26, 2020 to May 2021. location 1
 
  /nfs/exb/zinc22/tarballs - raw 50-mer tarballs Aug 26, 2020 to May 2021. location 1
 
  /nfs/exc/zinc23/tarballs - raw 50-mer tarballs Mar 30, 2021 to June 2021. location 2.
 
  /nfs/exc/zinc23/tarballs - raw 50-mer tarballs Mar 30, 2021 to June 2021. location 2.
 +
/nfs/exe/zinc23/tarballs - raw 50-mer tarballs July 2021 to Dec 2021. location 3.
 
  /nfs/exd/zinc22/tarballs - copy (mirror) of location 1
 
  /nfs/exd/zinc22/tarballs - copy (mirror) of location 1
 
  /nfs/exe/zinc22/tarballs - copy (mirror) of location 2
 
  /nfs/exe/zinc22/tarballs - copy (mirror) of location 2
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  /wynton/group/bks/zinc-22?/ - copy (mirror) or locations 1,2,3
 
  /wynton/group/bks/zinc-22?/ - copy (mirror) or locations 1,2,3
 
  Also mirrored on AWS.
 
  Also mirrored on AWS.
+
 
We have too many old copies of files. The intent is that we use this document to control the official location of files.
 
  
 
= By Topic =  
 
= By Topic =  

Revision as of 22:40, 3 May 2021

This document describes where files live, officially, on the cluster.

Lost and found

Are these needed?

/mnt/nfs/exc/zinc22/dude-xtract 

- Backups =

/nfs/exc/zinc22/psql-backups - TIN database backups
/nfs/exc/backups/  - infrastructure backups
/nfs/exc/bet - bet backups

By disk

50-mer tarballs

/nfs/exb/zinc22/tarballs - raw 50-mer tarballs Aug 26, 2020 to May 2021. location 1
/nfs/exc/zinc23/tarballs - raw 50-mer tarballs Mar 30, 2021 to June 2021. location 2.
/nfs/exe/zinc23/tarballs - raw 50-mer tarballs July 2021 to Dec 2021. location 3.
/nfs/exd/zinc22/tarballs - copy (mirror) of location 1
/nfs/exe/zinc22/tarballs - copy (mirror) of location 2
/nfs/exf/zinc22/tarballs - copy (mirror) of location 3

5000-mer tarballs

/nfs/exd/zinc-22?/ - 5000-mer tarballs, location 1. t-x
/nfs/exc/zinc-22?/ - 5000-mer tarballs, location 2. h-s
/nfs/exe/zinc-22?/ - 5000-mer tarballs, location 3. a-g
/wynton/group/bks/zinc-22?/ - copy (mirror) or locations 1,2,3
Also mirrored on AWS.


By Topic

2D SMILES

/nfs/exb/rawsmiles/

3D

/nfs/exa/zinc22/3D

By Location

disk what notes
db2 SSD 76TB /124TB fine tranches, smallworld
db3 SSD 118TB / 124 TB work
db5 SSD 124TB / 124TB smiles, zinc22
ex9 asdfasdf lots
exa qwer34 lots
exb 275 TB / 275 TB zinc22 tarballs
exc 275 TB / 275 TB zinc22 dockable
exd 275 TB / 275TB consolidate ex1-ex8


/nfs/exb/zinc22

This is where 3D databases of ZINC22 live. Within

  • The raw tarballs go in /nfs/exb/zinc22/tarballs/
  • 2D SMILES go

/nfs/exc/dock/zinc22

This is where the dockable version of zinc22 lives. It is organized by fine tranche HxxPyyy