# DOCK:Problems

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This is the UCSF DOCK problem page. There are other problem pages too:

- DOCK Blaster:Problems
- DUD:Problems
- DOCK:Problems
- Problems - all other problems go here.

## Docking problems in general

- treatment of entropy
- treatment of receptor desolvation
- treatment of induced-fit effects
- ligand internal energy

## DOCK 3.5.54

- prepare new distribution
- "collisions"
- inline out of box detection
- ligand internal energy
- write out multiple structures for PLOP